Weedy rice gets competitive boost from its wild neighbors

Weedy rice is an agricultural pest with a global economic impact. It is an aggressive weed that outcompetes cultivated rice and causes billions of dollars in yield losses worldwide. A study from Washington University in St. Louis offers new insights into genetic changes that give weedy rice its edge over cultivated rice in tropical regions of the world.

Green Genetic Engineering: Making Mendel’s Dream Come True with Molecular Scissors

Molecular biologist Professor Holger Puchta from Karlsruhe Institute of Technology (KIT) is granted funding within a Reinhart Koselleck Project by the German Research Foundation (DFG) for work on specific restructuring of plant genomes. Puchta, a pioneer of green genetic engineering,…

Breakthrough microscopy technique “supersizes” cells to reveal genetic activity

Breakthrough microscopy techniques are helping researchers visualize the ways our molecules interact with the human genome. Researchers at Yale School of Medicine used a series of expandable gels to pull apart a cell and expand it to 4000 times its…

MSU researchers uncover the hidden complexity of the Montmorency tart cherry genome

Since Michigan is the nation’s leading producer of tart cherries, Michigan State University researchers were searching for the genes associated with tart cherry trees that bloom later in the season to meet the needs of a changing climate. They started by comparing DNA sequences from late-blooming tart cherry trees to the sequenced genome of a related species, the peach. However, in a surprise to the researcher, the genetic discrepancies between the species outweighed the similarities. This led the team to create the first annotated Montmorency tart cherry genome and identify the DNA segments that code for each gene.

Van Andel Institute, Washington University School of Medicine in St. Louis to lead genome center under $140M NIH initiative

Van Andel Institute’s Hui Shen, Ph.D., and Washington University School of Medicine in St. Louis’s Ting Wang, Ph.D., will co-lead a collaborative project supported by the Somatic Mosaicism across Human Tissues (SMaHT) Network, a new $140 million National Institutes of Health-led effort to better understand the genetic differences between individual cells and tissues in the body.

UNLV Study Sheds Light on Ancient Microbial Dark Matter

Omnitrophota are nano-sized bacteria first discovered 25 years ago. Though common in many environments around the world, until now they’ve been poorly understood. An international research team produced the first large-scale analysis of Omnitrophota genomes, uncovering new details about their biology and behavior. The team’s findings are reported in the March 16 issue of the journal Nature Microbiology.

Large-Scale Study Led by Fred Hutch Finds New Genetic Risk Factors for Colorectal Cancer, Paving the Way for Better Screening, Prevention

A comprehensive analysis of more than 100,000 colorectal cancer (CRC) cases, led by researchers at the Fred Hutchinson Cancer Center in Seattle and 200 scientific collaborators worldwide, has identified more than 100 new genetic risk factors strongly linked with the disease.

Weedy rice has become herbicide resistant through rapid evolution

Biologists used whole-genome sequences of 48 contemporary weedy rice plants to show how herbicide resistance evolved by gene flow from crop rice. Almost all other cases of herbicide resistance in agricultural weeds result from selection of tolerant genotypes in the weed species.

Study identifies new dementia risk genes through novel testing approach

A new UCLA-led study has identified multiple new risk genes for Alzheimer’s disease and a rare, related brain disorder by using a combination of new testing methods allowing for mass screening of genetic variants in a single experiment. 

DNA recombinations are widespread in human genomes and are implicated in both development and disease

Scientists from the RIKEN Center for Integrative Medical Sciences in Japan in collaboration with other researchers from around the world have discovered that recombinations of specific genomic sequences that are repeated millions of times in the genome of each of our cells are pervasively found in both normal and in disease states. Identifying the mechanisms that lead to this myriad of recombinations involving DNA sequences that were once considered as “junk”, may be crucial to understanding how our cells develop and what can make them unhealthy.

Three New Species of Black-Bellied Salamander Found in Southern Appalachian Mountains

Three new species of black-bellied salamander have been discovered by a research team led by R. Alexander Pyron, the Robert F. Griggs Associate Professor of Biology at the George Washington University. The new salamanders, which are found in the southern Appalachian Mountains of the eastern United States, stem from black-bellied populations that were long considered to be a single species.

World’s New Stream Frog Found in Myanmar: Chula Researcher Indicates Its Ecosystem Is Intact

A biologist from the Faculty of Science, Chulalongkorn University working with researchers from Germany and Myanmar has discovered two of the world’s newest stream frogs in Myanmar highlighting the remaining diversity of ecosystems in Southeast Asia and cautions all those involved of the need to conserve our forests before our valuable wildlife become extinct.

Researchers Use Model of Hypothalamus to Implicate Genes Associated with Sleep, BMI, Puberty, and More

A new study has implicated several genes involved in a variety of bodily functions associated with the hypothalamus, a notoriously difficult-to-study region of the brain. The findings could help clinicians identify potential causes of dysfunction for many important traits regulated by the hypothalamus, such as sleep, stress, and reproduction.

UNH-Led Team Sequences Shea Tree Genome to Support Breeding and Conservation Efforts

An international team of researchers led by the University of New Hampshire has sequenced the shea tree’s genome, providing a valuable resource for the strategic development of the species which is best known for the popular product shea butter—a multimillion-dollar ingredient used in cosmetics, personal care products, pharmaceuticals and chocolate.

UCLA Health receives $4.8M NIH grant to improve genetic estimates of disease risk in diverse populations

UCLA Health will receive a $4.8 million grant from The National Institutes of Health to develop methods that will improve genetic risk estimates – polygenic risk scores – for specific diseases in people from diverse populations and mixed ancestries.

Overfishing of Atlantic Cod Likely Did Not Cause Genetic Changes

Overfishing likely did not cause the Atlantic cod, an iconic species, to evolve genetically and mature earlier, according to a study led by Rutgers University and the University of Oslo – the first of its kind – with major implications for ocean conservation.

Study Finds Neglected Mutations May Play Important Role in Autism Spectrum Disorder

Mutations that occur in certain DNA regions, called tandem repeats, may play a significant role in autism spectrum disorders, according to research led by Melissa Gymrek, assistant professor in the UC San Diego Department of Computer Science and Engineering and School of Medicine. The study, which was published in Nature on Jan. 14, was co-authored by UCLA professor of human genetics Kirk Lohmueller and highlights the contributions these understudied mutations can make to disease.

Genetic Code Evolution and Darwin’s Evolution Theory Should Consider DNA an ‘Energy Code’

Darwin’s theory of evolution should be expanded to include consideration of a DNA stability “energy code” – so-called “molecular Darwinism” – to further account for the long-term survival of species’ characteristics on Earth, according to Rutgers scientists. The iconic genetic code can be viewed as an “energy code” that evolved by following the laws of thermodynamics (flow of energy), causing its evolution to culminate in a nearly singular code for all living species, according to the Rutgers co-authored study in the journal Quarterly Review of Biophysics.

How Did Red Algae Survive in Extreme Environments?

Red algae have persisted in hot springs and surrounding rocks for about 1 billion years. Now, a Rutgers-led team will investigate why these single-celled extremists have thrived in harsh environments – research that could benefit environmental cleanups and the production of biofuels and other products.